This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1dzv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1dzv" [edit=sysop:move=sysop])
Current revision (09:56, 20 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1dzv.png|left|200px]]
 
-
<!--
+
==L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant Y113F/Y209F==
-
The line below this paragraph, containing "STRUCTURE_1dzv", creates the "Structure Box" on the page.
+
<StructureSection load='1dzv' size='340' side='right'caption='[[1dzv]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dzv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DZV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1dzv| PDB=1dzv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dzv OCA], [https://pdbe.org/1dzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dzv RCSB], [https://www.ebi.ac.uk/pdbsum/1dzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dzv ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FUCA_ECOLI FUCA_ECOLI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/1dzv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dzv ConSurf].
 +
<div style="clear:both"></div>
-
===L-FUCULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI MUTANT Y113F/Y209F===
+
==See Also==
-
 
+
*[[Aldolase 3D structures|Aldolase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10821675}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 10821675 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_10821675}}
+
-
 
+
-
==About this Structure==
+
-
[[1dzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DZV OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:10821675</ref><ref group="xtra">PMID:8676381</ref><ref group="xtra">PMID:8515438</ref><references group="xtra"/>
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: L-fuculose-phosphate aldolase]]
+
[[Category: Large Structures]]
-
[[Category: Joerger, A C.]]
+
[[Category: Joerger AC]]
-
[[Category: Schulz, G E.]]
+
[[Category: Schulz GE]]
-
[[Category: Bacterial l-fucose metabolism]]
+
-
[[Category: Cleavage of l-fuculose-1-phosphate to dihydroxyacetonephosphate and l-lactaldehyde]]
+
-
[[Category: Mutant structure]]
+

Current revision

L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant Y113F/Y209F

PDB ID 1dzv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1dzv"
Personal tools