This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1e00

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 20 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1e00.png|left|200px]]
 
-
<!--
+
==Porcine Odorant Binding Protein Complexed with 2,6-dimethyl-7-octen-2-ol==
-
The line below this paragraph, containing "STRUCTURE_1e00", creates the "Structure Box" on the page.
+
<StructureSection load='1e00' size='340' side='right'caption='[[1e00]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1e00]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E00 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DHM:2,6-DIMETHYL-7-OCTEN-2-OL'>DHM</scene></td></tr>
-
{{STRUCTURE_1e00| PDB=1e00 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e00 OCA], [https://pdbe.org/1e00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e00 RCSB], [https://www.ebi.ac.uk/pdbsum/1e00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e00 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/OBP_PIG OBP_PIG] This protein is found in nasal epithelium and it binds a wide variety of chemical odorants.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/1e00_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e00 ConSurf].
 +
<div style="clear:both"></div>
-
===PORCINE ODORANT BINDING PROTEIN COMPLEXED WITH 2,6-DIMETHYL-7-OCTEN-2-OL===
+
==See Also==
-
 
+
*[[Odorant binding protein 3D structures|Odorant binding protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10864504}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 10864504 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_10864504}}
+
-
 
+
-
==About this Structure==
+
-
1E00 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E00 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:10864504</ref><references group="xtra"/>
+
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Cambillau, C.]]
+
[[Category: Cambillau C]]
-
[[Category: Spinelli, S.]]
+
[[Category: Spinelli S]]
-
[[Category: Tegoni, M.]]
+
[[Category: Tegoni M]]
-
[[Category: Vincent, F.]]
+
[[Category: Vincent F]]
-
[[Category: Lipocalin]]
+
-
[[Category: Odorant binding protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:37:31 2009''
+

Current revision

Porcine Odorant Binding Protein Complexed with 2,6-dimethyl-7-octen-2-ol

PDB ID 1e00

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1e00"
Personal tools