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1f09

From Proteopedia

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[[Image:1f09.png|left|200px]]
 
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{{STRUCTURE_1f09| PDB=1f09 | SCENE= }}
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==CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES==
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<StructureSection load='1f09' size='340' side='right'caption='[[1f09]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
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===CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1f09]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F09 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F09 FirstGlance]. <br>
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{{ABSTRACT_PUBMED_10926499}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.14&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f09 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f09 OCA], [https://pdbe.org/1f09 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f09 RCSB], [https://www.ebi.ac.uk/pdbsum/1f09 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f09 ProSAT]</span></td></tr>
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[[1f09]] is a 1 chain structure of [[Alyssa Marsico/Sandbox 1]], [[Devon McCarthy/Sandbox 1]], [[Green Fluorescent Protein]], [[Sandbox104]] and [[User:Joanne Lau/Sandbox 5]] with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F09 OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/1f09_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f09 ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Alyssa Marsico/Sandbox 1|Alyssa Marsico/Sandbox 1]]
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*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
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*[[Devon McCarthy/Sandbox 1|Devon McCarthy/Sandbox 1]]
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__TOC__
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*[[Green Fluorescent Protein|Green Fluorescent Protein]]
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</StructureSection>
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*[[Sandbox104|Sandbox104]]
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*[[User:Joanne Lau/Sandbox 5|User:Joanne Lau/Sandbox 5]]
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==Reference==
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<ref group="xtra">PMID:010926499</ref><references group="xtra"/>
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[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
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[[Category: Kallio, K.]]
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[[Category: Large Structures]]
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[[Category: Remington, S J.]]
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[[Category: Kallio K]]
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[[Category: Wachter, R M.]]
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[[Category: Remington SJ]]
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[[Category: Yarbrough, D.]]
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[[Category: Wachter RM]]
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[[Category: Beta barrel]]
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[[Category: Yarbrough D]]
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[[Category: Bioluminescence]]
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[[Category: Green fluorescent protein]]
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[[Category: Luminescence]]
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[[Category: Luminescent protein]]
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[[Category: Photoactive protein]]
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Current revision

CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES

PDB ID 1f09

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