This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1fe2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:13, 20 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1fe2.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF DIHOMO-GAMMA-LINOLEIC ACID BOUND IN THE CYCLOOXYGENASE CHANNEL OF PROSTAGLANDIN ENDOPEROXIDE H SYNTHASE-1.==
-
The line below this paragraph, containing "STRUCTURE_1fe2", creates the "Structure Box" on the page.
+
<StructureSection load='1fe2' size='340' side='right'caption='[[1fe2]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1fe2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FE2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=COH:PROTOPORPHYRIN+IX+CONTAINING+CO'>COH</scene>, <scene name='pdbligand=LAX:EICOSA-8,11,14-TRIENOIC+ACID'>LAX</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_1fe2| PDB=1fe2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fe2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fe2 OCA], [https://pdbe.org/1fe2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fe2 RCSB], [https://www.ebi.ac.uk/pdbsum/1fe2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fe2 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGH1_SHEEP PGH1_SHEEP] May play an important role in regulating or promoting cell proliferation in some normal and neoplastically transformed cells.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/1fe2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fe2 ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF DIHOMO-GAMMA-LINOLEIC ACID BOUND IN THE CYCLOOXYGENASE CHANNEL OF PROSTAGLANDIN ENDOPEROXIDE H SYNTHASE-1.===
+
==See Also==
-
 
+
*[[Cyclooxygenase 3D structures|Cyclooxygenase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11121413}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11121413 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11121413}}
+
-
 
+
-
==About this Structure==
+
-
1FE2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FE2 OCA].
+
-
 
+
-
==Reference==
+
-
Mutational and X-ray crystallographic analysis of the interaction of dihomo-gamma -linolenic acid with prostaglandin endoperoxide H synthases., Thuresson ED, Malkowski MG, Lakkides KM, Rieke CJ, Mulichak AM, Ginell SL, Garavito RM, Smith WL, J Biol Chem. 2001 Mar 30;276(13):10358-65. Epub 2000 Dec 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11121413 11121413]
+
-
[[Category: D-amino-acid dehydrogenase]]
+
[[Category: Ovis aries]]
[[Category: Ovis aries]]
-
[[Category: Single protein]]
+
[[Category: Garavito RM]]
-
[[Category: Garavito, R M.]]
+
[[Category: Lakkides KM]]
-
[[Category: Lakkides, K M.]]
+
[[Category: Malkowski MG]]
-
[[Category: Malkowski, M G.]]
+
[[Category: Smith WL]]
-
[[Category: Smith, W L.]]
+
[[Category: Thuresson ED]]
-
[[Category: Thuresson, E D.]]
+
-
[[Category: Dihomo-gamma-linoleic acid]]
+
-
[[Category: Dioxygenase]]
+
-
[[Category: Fatty acid]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxidase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 03:06:48 2008''
+

Current revision

CRYSTAL STRUCTURE OF DIHOMO-GAMMA-LINOLEIC ACID BOUND IN THE CYCLOOXYGENASE CHANNEL OF PROSTAGLANDIN ENDOPEROXIDE H SYNTHASE-1.

PDB ID 1fe2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools