This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1fg4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_1fg4", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
Current revision (10:14, 20 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1fg4.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF TRYPAREDOXIN II==
-
The line below this paragraph, containing "STRUCTURE_1fg4", creates the "Structure Box" on the page.
+
<StructureSection load='1fg4' size='340' side='right'caption='[[1fg4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1fg4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Crithidia_fasciculata Crithidia fasciculata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FG4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FG4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fg4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fg4 OCA], [https://pdbe.org/1fg4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fg4 RCSB], [https://www.ebi.ac.uk/pdbsum/1fg4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fg4 ProSAT]</span></td></tr>
-
{{STRUCTURE_1fg4| PDB=1fg4 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===STRUCTURE OF TRYPAREDOXIN II===
+
[https://www.uniprot.org/uniprot/O77093_CRIFA O77093_CRIFA]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11347894}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11347894 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/1fg4_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_11347894}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fg4 ConSurf].
-
[[1fg4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Crithidia_fasciculata Crithidia fasciculata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FG4 OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:011347894</ref><references group="xtra"/>
+
[[Category: Crithidia fasciculata]]
[[Category: Crithidia fasciculata]]
-
[[Category: Bruns, K.]]
+
[[Category: Large Structures]]
-
[[Category: Budde, H.]]
+
[[Category: Bruns K]]
-
[[Category: Flohe, L.]]
+
[[Category: Budde H]]
-
[[Category: Guerrero, S A.]]
+
[[Category: Flohe L]]
-
[[Category: Hecht, H J.]]
+
[[Category: Guerrero SA]]
-
[[Category: Hofmann, B.]]
+
[[Category: Hecht HJ]]
-
[[Category: Kalisz, H M.]]
+
[[Category: Hofmann B]]
-
[[Category: Menge, U.]]
+
[[Category: Kalisz HM]]
-
[[Category: Montemartini, M.]]
+
[[Category: Menge U]]
-
[[Category: Nogoceke, E.]]
+
[[Category: Montemartini M]]
-
[[Category: Steinert, P.]]
+
[[Category: Nogoceke E]]
-
[[Category: Wissing, J B.]]
+
[[Category: Steinert P]]
-
[[Category: Electron transport]]
+
[[Category: Wissing JB]]

Current revision

STRUCTURE OF TRYPAREDOXIN II

PDB ID 1fg4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1fg4"
Personal tools