This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3sx6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 27 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3sx6.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of sulfide:quinone oxidoreductase Cys356Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone==
-
The line below this paragraph, containing "STRUCTURE_3sx6", creates the "Structure Box" on the page.
+
<StructureSection load='3sx6' size='340' side='right'caption='[[3sx6]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3sx6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidithiobacillus_ferrooxidans_ATCC_23270 Acidithiobacillus ferrooxidans ATCC 23270]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SX6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7955&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCQ:2-DECYL-5,6-DIMETHOXY-3-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE'>DCQ</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=H2S:HYDROSULFURIC+ACID'>H2S</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3sx6| PDB=3sx6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sx6 OCA], [https://pdbe.org/3sx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sx6 RCSB], [https://www.ebi.ac.uk/pdbsum/3sx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sx6 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of sulfide:quinone oxidoreductase Cys356Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/SQRD_ACIF2 SQRD_ACIF2] Catalyzes the oxidation of hydrogen sulfide, with the help of a quinone. Consecutive reaction cycles lead to the accumulation of a polysulfide product on the active site Cys residues; these products are released when they exceed a critical length, typically as cyclooctasulfur.<ref>PMID:20303979</ref> <ref>PMID:22542586</ref>
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22542586}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 22542586 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Acidithiobacillus ferrooxidans ATCC 23270]]
-
{{ABSTRACT_PUBMED_22542586}}
+
[[Category: Large Structures]]
-
 
+
[[Category: Cherney MM]]
-
==About this Structure==
+
[[Category: James MNG]]
-
[[3sx6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acidithiobacillus_ferrooxidans Acidithiobacillus ferrooxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SX6 OCA].
+
[[Category: Weiner JH]]
-
 
+
[[Category: Zhang Y]]
-
==Reference==
+
-
<ref group="xtra">PMID:022542586</ref><references group="xtra"/>
+
-
[[Category: Acidithiobacillus ferrooxidans]]
+
-
[[Category: Cherney, M M.]]
+
-
[[Category: James, M N.G.]]
+
-
[[Category: Weiner, J H.]]
+
-
[[Category: Zhang, Y.]]
+
-
[[Category: Complex with sulfide and decylubiquinone]]
+
-
[[Category: Cys356ala variant]]
+
-
[[Category: Integral monotopic membrane protein]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Sulfide:quinone oxidoreductase]]
+

Current revision

Crystal structure of sulfide:quinone oxidoreductase Cys356Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone

PDB ID 3sx6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3sx6"
Personal tools