This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ifq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:33, 27 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6ifq' size='340' side='right'caption='[[6ifq]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='6ifq' size='340' side='right'caption='[[6ifq]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6ifq]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IFQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ifq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O395 Vibrio cholerae O395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IFQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclic-guanylate-specific_phosphodiesterase Cyclic-guanylate-specific phosphodiesterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.4.52 3.1.4.52] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ifq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ifq OCA], [http://pdbe.org/6ifq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ifq RCSB], [http://www.ebi.ac.uk/pdbsum/6ifq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ifq ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ifq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ifq OCA], [https://pdbe.org/6ifq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ifq RCSB], [https://www.ebi.ac.uk/pdbsum/6ifq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ifq ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H3AJ04_VIBC3 A0A0H3AJ04_VIBC3]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cyclic-guanylate-specific phosphodiesterase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pal, K]]
+
[[Category: Vibrio cholerae O395]]
-
[[Category: Sen, U]]
+
[[Category: Pal K]]
-
[[Category: Yadav, M]]
+
[[Category: Sen U]]
-
[[Category: Cyclic dinucleotide phosphodiesterase]]
+
[[Category: Yadav M]]
-
[[Category: Hydrolase]]
+
-
[[Category: Nucleotide binding]]
+

Current revision

Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - Apo form

PDB ID 6ifq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools