6knc
From Proteopedia
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| - | ==== | + | ==PolD-PCNA-DNA (form B)== |
| - | <StructureSection load='6knc' size='340' side='right'caption='[[6knc]]' scene=''> | + | <StructureSection load='6knc' size='340' side='right'caption='[[6knc]], [[Resolution|resolution]] 9.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6knc]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis Thermococcus kodakarensis], [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KNC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KNC FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9.3Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6knc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6knc OCA], [https://pdbe.org/6knc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6knc RCSB], [https://www.ebi.ac.uk/pdbsum/6knc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6knc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5JET1_THEKO Q5JET1_THEKO] Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase.[ARBA:ARBA00024817][HAMAP-Rule:MF_00325] | ||
| + | |||
| + | ==See Also== | ||
| + | *[[DNA polymerase 3D structures|DNA polymerase 3D structures]] | ||
| + | *[[Proliferating cell nuclear antigen 3D structures|Proliferating cell nuclear antigen 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Synthetic construct]] |
| + | [[Category: Thermococcus kodakarensis]] | ||
| + | [[Category: Thermococcus kodakarensis KOD1]] | ||
| + | [[Category: Ishino S]] | ||
| + | [[Category: Ishino Y]] | ||
| + | [[Category: Iwasaki K]] | ||
| + | [[Category: Kohda D]] | ||
| + | [[Category: Mayanagi K]] | ||
| + | [[Category: Miyazaki N]] | ||
| + | [[Category: Morikawa K]] | ||
| + | [[Category: Oki K]] | ||
| + | [[Category: Shirai T]] | ||
| + | [[Category: Yamagami T]] | ||
Current revision
PolD-PCNA-DNA (form B)
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