This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6l8o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:45, 27 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of the K. lactis Rad5 (Hg-derivative)==
==Crystal structure of the K. lactis Rad5 (Hg-derivative)==
-
<StructureSection load='6l8o' size='340' side='right'caption='[[6l8o]]' scene=''>
+
<StructureSection load='6l8o' size='340' side='right'caption='[[6l8o]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8O OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6L8O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6l8o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Kluyveromyces_lactis_NRRL_Y-1140 Kluyveromyces lactis NRRL Y-1140]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L8O FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6l8o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8o OCA], [http://pdbe.org/6l8o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l8o RCSB], [http://www.ebi.ac.uk/pdbsum/6l8o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8o ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l8o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8o OCA], [https://pdbe.org/6l8o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l8o RCSB], [https://www.ebi.ac.uk/pdbsum/6l8o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8o ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RAD5_KLULA RAD5_KLULA] Probable helicase, member of the UBC2/RAD6 epistasis group. Functions with DNA repair protein RAD18 in error-free postreplication DNA repair. Involved in the maintenance of wild-type rates of instability of simple repetitive sequences such as poly(GT) repeats. Seems to be involved in maintaining a balance which acts in favor of error-prone non-homologous joining during DNA double-strand breaks repairs (By similarity).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Kluyveromyces lactis NRRL Y-1140]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Shen M]]
[[Category: Shen M]]
[[Category: Xiang S]]
[[Category: Xiang S]]

Current revision

Crystal structure of the K. lactis Rad5 (Hg-derivative)

PDB ID 6l8o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools