This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7d0l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:52, 27 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7d0l' size='340' side='right'caption='[[7d0l]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
<StructureSection load='7d0l' size='340' side='right'caption='[[7d0l]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7d0l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Omono_river_virus Omono river virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D0L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D0L FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7d0l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Omono_River_virus Omono River virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D0L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D0L FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d0l OCA], [https://pdbe.org/7d0l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d0l RCSB], [https://www.ebi.ac.uk/pdbsum/7d0l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d0l ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d0l OCA], [https://pdbe.org/7d0l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d0l RCSB], [https://www.ebi.ac.uk/pdbsum/7d0l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d0l ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/A0A7M3VBX7_9VIRU A0A7M3VBX7_9VIRU]
-
Mosquito viruses cause unpredictable outbreaks of disease. Recently, several unassigned viruses isolated from mosquitoes, including the Omono River virus (OmRV), were identified as totivirus-like viruses, with features similar to those of the Totiviridae family. Most reported members of this family infect fungi or protozoans and lack an extracellular life cycle stage. Here, we identified a new strain of OmRV and determined high-resolution structures for this virus using single-particle cryo-electron microscopy. The structures feature an unexpected protrusion at the five-fold vertex of the capsid. Disassociation of the protrusion could result in several conformational changes in the major capsid. All these structures, together with some biological results, suggest the protrusions' associations with the extracellular transmission of OmRV.
+
-
 
+
-
Cryo-EM reveals a previously unrecognized structural protein of a dsRNA virus implicated in its extracellular transmission.,Shao Q, Jia X, Gao Y, Liu Z, Zhang H, Tan Q, Zhang X, Zhou H, Li Y, Wu, Zhang Q PLoS Pathog. 2021 Mar 17;17(3):e1009396. doi: 10.1371/journal.ppat.1009396., eCollection 2021 Mar. PMID:33730056<ref>PMID:33730056</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 7d0l" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Omono river virus]]
+
[[Category: Omono River virus]]
-
[[Category: Gao, Y]]
+
[[Category: Gao Y]]
-
[[Category: Jia, X]]
+
[[Category: Jia X]]
-
[[Category: Liu, Z]]
+
[[Category: Liu Z]]
-
[[Category: Shao, Q]]
+
[[Category: Shao Q]]
-
[[Category: Major capsid]]
+
-
[[Category: Totiviridae]]
+
-
[[Category: Viral protein]]
+
-
[[Category: Virus]]
+

Current revision

The major capsid of Omono River virus (strain:LZ), protrusion-free status.

PDB ID 7d0l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/7d0l"
Personal tools