This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1fvg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1fvg" size="450" color="white" frame="true" align="right" spinBox="true" caption="1fvg, resolution 1.6&Aring;" /> '''CRYSTAL STRUCTURE OF ...)
Current revision (11:16, 27 March 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1fvg.gif|left|200px]]<br /><applet load="1fvg" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1fvg, resolution 1.6&Aring;" />
 
-
'''CRYSTAL STRUCTURE OF BOVINE PEPTIDE METHIONINE SULFOXIDE REDUCTASE'''<br />
 
-
==Overview==
+
==CRYSTAL STRUCTURE OF BOVINE PEPTIDE METHIONINE SULFOXIDE REDUCTASE==
-
Peptide methionine sulfoxide reductase (MsrA) reverses oxidative damage to, both free methionine and methionine within proteins. As such, it helps, protect the host organism against stochastic damage that can contribute to, cell death. The structure of bovine MsrA has been determined in two, different modifications, both of which provide different insights into the, biology of the protein. There are three cysteine residues located in the, vicinity of the active site. Conformational changes in a glycine-rich, C-terminal tail appear to allow all three thiols to come together and to, participate in catalysis. The structures support a unique, thiol-disulfide, exchange mechanism that relies upon an essential cysteine as a nucleophile, and additional conserved residues that interact with the oxygen atom of, the sulfoxide moiety.
+
<StructureSection load='1fvg' size='340' side='right'caption='[[1fvg]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1fvg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FVG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FVG FirstGlance]. <br>
-
1FVG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with DTT as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Peptide-methionine-(S)-S-oxide_reductase Peptide-methionine-(S)-S-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.11 1.8.4.11] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1FVG OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fvg OCA], [https://pdbe.org/1fvg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fvg RCSB], [https://www.ebi.ac.uk/pdbsum/1fvg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fvg ProSAT]</span></td></tr>
-
Structure and mechanism of peptide methionine sulfoxide reductase, an "anti-oxidation" enzyme., Lowther WT, Brot N, Weissbach H, Matthews BW, Biochemistry. 2000 Nov 7;39(44):13307-12. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11063566 11063566]
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MSRA_BOVIN MSRA_BOVIN] Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fv/1fvg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fvg ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Peptide-methionine-(S)-S-oxide reductase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Brot N]]
-
[[Category: Brot, N.]]
+
[[Category: Lowther WT]]
-
[[Category: Lowther, W.T.]]
+
[[Category: Matthews BW]]
-
[[Category: Matthews, B.W.]]
+
[[Category: Weissbach H]]
-
[[Category: Weissbach, H.]]
+
-
[[Category: DTT]]
+
-
[[Category: oxidoreductase]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 15:20:06 2007''
+

Current revision

CRYSTAL STRUCTURE OF BOVINE PEPTIDE METHIONINE SULFOXIDE REDUCTASE

PDB ID 1fvg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1fvg"
Personal tools