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1h5e
From Proteopedia
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| - | [[Image:1h5e.png|left|200px]] | ||
| - | + | ==X-ray induced reduction of horseradish peroxidase C1A Compound III (11-22% dose)== | |
| - | + | <StructureSection load='1h5e' size='340' side='right'caption='[[1h5e]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1h5e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H5E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H5E FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h5e OCA], [https://pdbe.org/1h5e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h5e RCSB], [https://www.ebi.ac.uk/pdbsum/1h5e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h5e ProSAT]</span></td></tr> |
| - | [[1h5e]] is a 1 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/1h5e_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h5e ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Horseradish peroxidase|Horseradish peroxidase]] | *[[Horseradish peroxidase|Horseradish peroxidase]] | ||
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Armoracia rusticana]] | [[Category: Armoracia rusticana]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Berglund | + | [[Category: Berglund GI]] |
| - | [[Category: Carlsson | + | [[Category: Carlsson GH]] |
| - | [[Category: Hajdu | + | [[Category: Hajdu J]] |
| - | [[Category: Henriksen | + | [[Category: Henriksen A]] |
| - | [[Category: Smith | + | [[Category: Smith AT]] |
| - | [[Category: Szoke | + | [[Category: Szoke H]] |
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Current revision
X-ray induced reduction of horseradish peroxidase C1A Compound III (11-22% dose)
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