This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1hdh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:30, 27 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1hdh.png|left|200px]]
 
-
<!--
+
==Arylsulfatase from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_1hdh", creates the "Structure Box" on the page.
+
<StructureSection load='1hdh' size='340' side='right'caption='[[1hdh]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1hdh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HDH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HDH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DDZ:3,3-DIHYDROXY+L-ALANINE'>DDZ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1hdh| PDB=1hdh | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hdh OCA], [https://pdbe.org/1hdh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hdh RCSB], [https://www.ebi.ac.uk/pdbsum/1hdh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hdh ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ARS_PSEAE ARS_PSEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/1hdh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hdh ConSurf].
 +
<div style="clear:both"></div>
-
===ARYLSULFATASE FROM PSEUDOMONAS AERUGINOSA===
+
==See Also==
-
 
+
*[[Sulfatase 3D structures|Sulfatase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11435113}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11435113 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11435113}}
+
-
 
+
-
==About this Structure==
+
-
1HDH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HDH OCA].
+
-
 
+
-
==Reference==
+
-
1.3 A structure of arylsulfatase from Pseudomonas aeruginosa establishes the catalytic mechanism of sulfate ester cleavage in the sulfatase family., Boltes I, Czapinska H, Kahnert A, von Bulow R, Dierks T, Schmidt B, von Figura K, Kertesz MA, Uson I, Structure. 2001 Jun;9(6):483-91. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11435113 11435113]
+
-
[[Category: Arylsulfatase]]
+
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Boltes I]]
-
[[Category: Boltes, I.]]
+
[[Category: Czapinska H]]
-
[[Category: Buelow, R V.]]
+
[[Category: Dirks T]]
-
[[Category: Czapinska, H.]]
+
[[Category: Kahnert A]]
-
[[Category: Dirks, T.]]
+
[[Category: Kertesz MA]]
-
[[Category: Figura, K V.]]
+
[[Category: Schmidt B]]
-
[[Category: Kahnert, A.]]
+
[[Category: Uson I]]
-
[[Category: Kertesz, M A.]]
+
[[Category: Von Buelow R]]
-
[[Category: Schmidt, B.]]
+
[[Category: Von Figura K]]
-
[[Category: Uson, I.]]
+
-
[[Category: Formylglycine hydrate]]
+
-
[[Category: Sulfatase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 08:02:02 2008''
+

Current revision

Arylsulfatase from Pseudomonas aeruginosa

PDB ID 1hdh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1hdh"
Personal tools