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1hj7

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(New page: 200px<br /> <applet load="1hj7" size="450" color="white" frame="true" align="right" spinBox="true" caption="1hj7" /> '''NMR STUDY OF A PAIR OF LDL RECEPTOR CA2+ BI...)
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[[Image:1hj7.gif|left|200px]]<br />
 
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<applet load="1hj7" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1hj7" />
 
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'''NMR STUDY OF A PAIR OF LDL RECEPTOR CA2+ BINDING EPIDERMAL GROWTH FACTOR-LIKE DOMAINS, 20 STRUCTURES'''<br />
 
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==Overview==
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==NMR study of a pair of LDL receptor Ca2+ binding epidermal growth factor-like domains, 20 structures==
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BACKGROUND: From the observed structure and sequence of a pair of calcium, binding (cb) epidermal growth factor-like (EGF) domains from human, fibrillin-1, we proposed that many tandem cbEGF domains adopt a conserved, relative conformation. The low-density lipoprotein receptor (LDLR), which, is functionally unrelated to fibrillin-1, contains a single pair of EGF, domains that was chosen for study in the validation of this hypothesis., The LDLR is the protein that is defective in familial, hypercholesterolaemia, a common genetic disorder that predisposes, individuals to cardiovascular complications and premature death. RESULTS:, Here, we present the solution structure of the first two EGF domains from, the LDL receptor, determined using conventional NMR restraints and, residual dipolar ... [[http://ispc.weizmann.ac.il/pmbin/getpm?11435110 (full description)]]
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<StructureSection load='1hj7' size='340' side='right'caption='[[1hj7]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1hj7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HJ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HJ7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hj7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hj7 OCA], [https://pdbe.org/1hj7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hj7 RCSB], [https://www.ebi.ac.uk/pdbsum/1hj7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hj7 ProSAT]</span></td></tr>
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</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/LDLR_HUMAN LDLR_HUMAN] Defects in LDLR are the cause of familial hypercholesterolemia (FH) [MIM:[https://omim.org/entry/143890 143890]; a common autosomal semi-dominant disease that affects about 1 in 500 individuals. The receptor defect impairs the catabolism of LDL, and the resultant elevation in plasma LDL-cholesterol promotes deposition of cholesterol in the skin (xanthelasma), tendons (xanthomas), and coronary arteries (atherosclerosis).<ref>PMID:3263645</ref> <ref>PMID:2569482</ref> <ref>PMID:3955657</ref> <ref>PMID:8347689</ref> <ref>PMID:2318961</ref> <ref>PMID:1446662</ref> <ref>PMID:1867200</ref> <ref>PMID:8462973</ref> <ref>PMID:8168830</ref> <ref>PMID:2726768</ref> <ref>PMID:1464748</ref> <ref>PMID:7573037</ref> <ref>PMID:7583548</ref> <ref>PMID:7550239</ref> <ref>PMID:7635461</ref> <ref>PMID:7635482</ref> <ref>PMID:7649546</ref> <ref>PMID:7649549</ref> <ref>PMID:8740918</ref> <ref>PMID:8664907</ref> <ref>PMID:9026534</ref> <ref>PMID:9254862</ref> <ref>PMID:9143924</ref> <ref>PMID:9259195</ref> <ref>PMID:9104431</ref> <ref>PMID:9654205</ref> <ref>PMID:9452094</ref> <ref>PMID:9452095</ref> <ref>PMID:9452118</ref> <ref>PMID:10206683</ref> <ref>PMID:10660340</ref> [:]<ref>PMID:9852677</ref> <ref>PMID:9678702</ref> <ref>PMID:10422803</ref> <ref>PMID:10090484</ref> <ref>PMID:10447263</ref> <ref>PMID:10978268</ref> <ref>PMID:10980548</ref> <ref>PMID:10882754</ref> <ref>PMID:11298688</ref> <ref>PMID:17142622</ref> <ref>PMID:19319977</ref> <ref>PMID:22160468</ref>
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== Function ==
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[https://www.uniprot.org/uniprot/LDLR_HUMAN LDLR_HUMAN] Binds LDL, the major cholesterol-carrying lipoprotein of plasma, and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits. In case of HIV-1 infection, functions as a receptor for extracellular Tat in neurons, mediating its internalization in uninfected cells.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/1hj7_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hj7 ConSurf].
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<div style="clear:both"></div>
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==About this Structure==
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==See Also==
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1HJ7 is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]] with CA as [[http://en.wikipedia.org/wiki/ligand ligand]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1HJ7 OCA]].
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*[[LDL receptor|LDL receptor]]
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== References ==
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==Reference==
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<references/>
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Solution structure of the LDL receptor EGF-AB pair: a paradigm for the assembly of tandem calcium binding EGF domains., Saha S, Boyd J, Werner JM, Knott V, Handford PA, Campbell ID, Downing AK, Structure. 2001 Jun;9(6):451-6. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11435110 11435110]
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Campbell, I.D.]]
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[[Category: Campbell ID]]
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[[Category: Downing, A.K.]]
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[[Category: Downing AK]]
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[[Category: Handford, P.A.]]
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[[Category: Handford PA]]
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[[Category: Saha, S.]]
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[[Category: Saha S]]
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[[Category: CA]]
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[[Category: apo-b]]
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[[Category: apo-e]]
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[[Category: calcium-binding]]
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[[Category: cell-surface receptor]]
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[[Category: egf-like domain]]
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[[Category: ldl]]
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[[Category: module]]
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[[Category: vldl]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 19:27:19 2007''
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Current revision

NMR study of a pair of LDL receptor Ca2+ binding epidermal growth factor-like domains, 20 structures

PDB ID 1hj7

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