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1idk
From Proteopedia
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| - | [[Image:1idk.png|left|200px]] | ||
| - | + | ==PECTIN LYASE A== | |
| - | + | <StructureSection load='1idk' size='340' side='right'caption='[[1idk]], [[Resolution|resolution]] 1.93Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1idk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IDK FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1idk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1idk OCA], [https://pdbe.org/1idk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1idk RCSB], [https://www.ebi.ac.uk/pdbsum/1idk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1idk ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1idk]] is a 1 chain structure with sequence from [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/PELA_ASPNG PELA_ASPNG] Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins. | |
| - | == | + | == Evolutionary Conservation == |
| - | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/1idk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1idk ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Aspergillus niger]] | [[Category: Aspergillus niger]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Benen | + | [[Category: Benen J]] |
| - | [[Category: Connerton | + | [[Category: Connerton I]] |
| - | [[Category: Gravesen | + | [[Category: Gravesen T]] |
| - | [[Category: Jenkins | + | [[Category: Jenkins J]] |
| - | [[Category: Mayans | + | [[Category: Mayans O]] |
| - | [[Category: Pickersgill | + | [[Category: Pickersgill R]] |
| - | [[Category: Scott | + | [[Category: Scott M]] |
| - | [[Category: Visser | + | [[Category: Visser J]] |
| - | + | ||
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Current revision
PECTIN LYASE A
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Categories: Aspergillus niger | Large Structures | Benen J | Connerton I | Gravesen T | Jenkins J | Mayans O | Pickersgill R | Scott M | Visser J
