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1idk

From Proteopedia

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{{Seed}}
 
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[[Image:1idk.png|left|200px]]
 
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<!--
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==PECTIN LYASE A==
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The line below this paragraph, containing "STRUCTURE_1idk", creates the "Structure Box" on the page.
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<StructureSection load='1idk' size='340' side='right'caption='[[1idk]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1idk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IDK FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1idk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1idk OCA], [https://pdbe.org/1idk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1idk RCSB], [https://www.ebi.ac.uk/pdbsum/1idk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1idk ProSAT]</span></td></tr>
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{{STRUCTURE_1idk| PDB=1idk | SCENE= }}
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</table>
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== Function ==
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===PECTIN LYASE A===
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[https://www.uniprot.org/uniprot/PELA_ASPNG PELA_ASPNG] Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_9195887}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 9195887 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/1idk_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_9195887}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1idk ConSurf].
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1IDK is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IDK OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:9195887</ref><references group="xtra"/>
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[[Category: Aspergillus niger]]
[[Category: Aspergillus niger]]
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[[Category: Pectin lyase]]
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[[Category: Large Structures]]
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[[Category: Benen, J.]]
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[[Category: Benen J]]
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[[Category: Connerton, I.]]
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[[Category: Connerton I]]
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[[Category: Gravesen, T.]]
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[[Category: Gravesen T]]
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[[Category: Jenkins, J.]]
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[[Category: Jenkins J]]
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[[Category: Mayans, O.]]
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[[Category: Mayans O]]
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[[Category: Pickersgill, R.]]
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[[Category: Pickersgill R]]
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[[Category: Scott, M.]]
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[[Category: Scott M]]
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[[Category: Visser, J.]]
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[[Category: Visser J]]
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[[Category: Glycoprotein]]
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[[Category: Lyase]]
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[[Category: Multigene family]]
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[[Category: Signal]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:39:40 2009''
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Current revision

PECTIN LYASE A

PDB ID 1idk

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