This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jp7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1jp7" [edit=sysop:move=sysop])
Current revision (06:04, 3 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jp7.png|left|200px]]
 
-
{{STRUCTURE_1jp7| PDB=1jp7 | SCENE= }}
+
==Crystal Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase==
 +
<StructureSection load='1jp7' size='340' side='right'caption='[[1jp7]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1jp7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JP7 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jp7 OCA], [https://pdbe.org/1jp7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jp7 RCSB], [https://www.ebi.ac.uk/pdbsum/1jp7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jp7 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PNPH_SACS2 PNPH_SACS2] Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules. Cleaves inosine, guanosine, and adenosine with a better efficiency than MTA.<ref>PMID:15819883</ref> <ref>PMID:7929153</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jp/1jp7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jp7 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase===
+
==See Also==
-
 
+
*[[5'-deoxy-5'-methylthioadenosine phosphorylase 3D structures|5'-deoxy-5'-methylthioadenosine phosphorylase 3D structures]]
-
{{ABSTRACT_PUBMED_11489901}}
+
== References ==
-
 
+
<references/>
-
==About this Structure==
+
__TOC__
-
[[1jp7]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JP7 OCA].
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
==Reference==
+
[[Category: Saccharolobus solfataricus]]
-
<ref group="xtra">PMID:011489901</ref><references group="xtra"/>
+
[[Category: Appleby TC]]
-
[[Category: S-methyl-5'-thioadenosine phosphorylase]]
+
[[Category: Cacciapuoti G]]
-
[[Category: Sulfolobus solfataricus]]
+
[[Category: Ealick SE]]
-
[[Category: Appleby, T C.]]
+
[[Category: Mathews II]]
-
[[Category: Cacciapuoti, G.]]
+
[[Category: Porcelli M]]
-
[[Category: Ealick, S E.]]
+
-
[[Category: Mathews, I I.]]
+
-
[[Category: Porcelli, M.]]
+
-
[[Category: Alpha-beta protein]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase

PDB ID 1jp7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1jp7"
Personal tools