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1pam

From Proteopedia

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{{Seed}}
 
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[[Image:1pam.png|left|200px]]
 
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<!--
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==CYCLODEXTRIN GLUCANOTRANSFERASE==
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The line below this paragraph, containing "STRUCTURE_1pam", creates the "Structure Box" on the page.
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<StructureSection load='1pam' size='340' side='right'caption='[[1pam]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1pam]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._1011 Bacillus sp. 1011]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PAM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_1pam| PDB=1pam | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pam OCA], [https://pdbe.org/1pam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pam RCSB], [https://www.ebi.ac.uk/pdbsum/1pam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pam ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CDGT_BACS0 CDGT_BACS0]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pa/1pam_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pam ConSurf].
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<div style="clear:both"></div>
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===CYCLODEXTRIN GLUCANOTRANSFERASE===
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==See Also==
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*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_15299574}}, adds the Publication Abstract to the page
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[[Category: Bacillus sp. 1011]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15299574 is the PubMed ID number.
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[[Category: Large Structures]]
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-->
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[[Category: Aoyagi M]]
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{{ABSTRACT_PUBMED_15299574}}
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[[Category: Haga K]]
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[[Category: Harata K]]
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==About this Structure==
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[[Category: Nakamura A]]
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1PAM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_sp. Bacillus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PAM OCA].
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[[Category: Yamane K]]
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==Reference==
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X-ray structure of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011. Comparison of two independent molecules at 1.8 A resolution., Harata K, Haga K, Nakamura A, Aoyagi M, Yamane K, Acta Crystallogr D Biol Crystallogr. 1996 Nov 1;52(Pt 6):1136-45. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15299574 15299574]
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[[Category: Bacillus sp.]]
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[[Category: Cyclomaltodextrin glucanotransferase]]
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[[Category: Single protein]]
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[[Category: Aoyagi, M.]]
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[[Category: Haga, K.]]
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[[Category: Harata, K.]]
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[[Category: Nakamura, A.]]
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[[Category: Yamane, K.]]
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[[Category: Calcium]]
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[[Category: Glycosyltransferase]]
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[[Category: Signal]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 17:27:05 2008''
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Current revision

CYCLODEXTRIN GLUCANOTRANSFERASE

PDB ID 1pam

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