This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1st9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1st9" size="450" color="white" frame="true" align="right" spinBox="true" caption="1st9, resolution 1.50&Aring;" /> '''Crystal Structure of...)
Current revision (06:14, 3 April 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1st9.jpg|left|200px]]<br /><applet load="1st9" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1st9, resolution 1.50&Aring;" />
 
-
'''Crystal Structure of a Soluble Domain of ResA in the Oxidised Form'''<br />
 
-
==Overview==
+
==Crystal Structure of a Soluble Domain of ResA in the Oxidised Form==
-
Post-translational maturation of cytochromes c involves the covalent, attachment of heme to the Cys-Xxx-Xxx-Cys-His motif of the apo-cytochrome., For this process, the two cysteines of the motif must be in the reduced, state. In bacteria, this is achieved by dedicated, membrane-bound, thiol-disulfide oxidoreductases with a high reducing power, which are, essential components of cytochrome c maturation systems and are also, linked to cellular disulfide-bond formation machineries. Here we report, high-resolution structures of oxidized and reduced states of a soluble, functional domain of one such oxidoreductase, ResA, from Bacillus, subtilis. The structures elucidate the structural basis of the protein's, high reducing power and reveal the largest redox-coupled conformational, changes observed to date in any thioredoxin-like protein. These, redox-coupled changes alter the protein surface and illustrate how the, redox state of ResA predetermines to which substrate it binds., Furthermore, a polar cavity, present only in the reduced state, may confer, specificity to recognize apo-cytochrome c. The described features of ResA, are likely to be general for bacterial cytochrome c maturation systems.
+
<StructureSection load='1st9' size='340' side='right'caption='[[1st9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1st9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ST9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ST9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1st9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1st9 OCA], [https://pdbe.org/1st9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1st9 RCSB], [https://www.ebi.ac.uk/pdbsum/1st9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1st9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RESA_BACSU RESA_BACSU] Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached. Does not play a role in sporulation.<ref>PMID:12637552</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/st/1st9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1st9 ConSurf].
 +
<div style="clear:both"></div>
-
==About this Structure==
+
==See Also==
-
1ST9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with EDO as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1ST9 OCA].
+
*[[Protein disulfide oxidoreductase 3D structures|Protein disulfide oxidoreductase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
Structural basis of Redox-coupled protein substrate selection by the cytochrome c biosynthesis protein ResA., Crow A, Acheson RM, Le Brun NE, Oubrie A, J Biol Chem. 2004 May 28;279(22):23654-60. Epub 2004 Mar 26. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15047692 15047692]
+
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Acheson, R.M.]]
+
[[Category: Acheson RM]]
-
[[Category: Brun, N.E.Le.]]
+
[[Category: Crow A]]
-
[[Category: Crow, A.]]
+
[[Category: Le Brun NE]]
-
[[Category: Oubrie, A.]]
+
[[Category: Oubrie A]]
-
[[Category: EDO]]
+
-
[[Category: alpha-beta protein]]
+
-
[[Category: membrane protein]]
+
-
[[Category: soluble domain]]
+
-
[[Category: thioredoxin-like domain]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:38:43 2007''
+

Current revision

Crystal Structure of a Soluble Domain of ResA in the Oxidised Form

PDB ID 1st9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools