This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sue

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:14, 3 April 2024) (edit) (undo)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sue.gif|left|200px]]<br />
 
-
<applet load="1sue" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1sue, resolution 1.8&Aring;" />
 
-
'''SUBTILISIN BPN' FROM BACILLUS AMYLOLIQUEFACIENS, MUTANT'''<br />
 
-
==About this Structure==
+
==SUBTILISIN BPN' FROM BACILLUS AMYLOLIQUEFACIENS, MUTANT==
-
1SUE is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]] with NA and DFP as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/Subtilisin Subtilisin]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.62 3.4.21.62]]. Structure known Active Site: ACT. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1SUE OCA]].
+
<StructureSection load='1sue' size='340' side='right'caption='[[1sue]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Bacillus amyloliquefaciens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1sue]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SUE FirstGlance]. <br>
-
[[Category: Subtilisin]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Bryan, P.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DFP:DIISOPROPYL+PHOSPHONATE'>DFP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
[[Category: Gallagher, D.T.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sue OCA], [https://pdbe.org/1sue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sue RCSB], [https://www.ebi.ac.uk/pdbsum/1sue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sue ProSAT]</span></td></tr>
-
[[Category: Gilliland, G.L.]]
+
</table>
-
[[Category: Pan, Q.]]
+
== Function ==
-
[[Category: DFP]]
+
[https://www.uniprot.org/uniprot/SUBT_BACAM SUBT_BACAM] Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides. Has a high substrate specificity to fibrin.<ref>PMID:12524032</ref>
-
[[Category: NA]]
+
== Evolutionary Conservation ==
-
[[Category: hydrolase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: serine protease]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/su/1sue_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sue ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 11:24:07 2007''
+
==See Also==
 +
*[[Subtilisin 3D structures|Subtilisin 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus amyloliquefaciens]]
 +
[[Category: Large Structures]]
 +
[[Category: Bryan P]]
 +
[[Category: Gallagher DT]]
 +
[[Category: Gilliland GL]]
 +
[[Category: Pan Q]]

Current revision

SUBTILISIN BPN' FROM BACILLUS AMYLOLIQUEFACIENS, MUTANT

PDB ID 1sue

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools