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1t9f
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1t9f" size="450" color="white" frame="true" align="right" spinBox="true" caption="1t9f, resolution 2.00Å" /> '''Structural genomics ...) |
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| - | [[Image:1t9f.jpg|left|200px]]<br /><applet load="1t9f" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1t9f, resolution 2.00Å" /> | ||
| - | '''Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function'''<br /> | ||
| - | == | + | ==Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function== |
| - | + | <StructureSection load='1t9f' size='340' side='right'caption='[[1t9f]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1t9f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T9F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T9F FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t9f OCA], [https://pdbe.org/1t9f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t9f RCSB], [https://www.ebi.ac.uk/pdbsum/1t9f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t9f ProSAT], [https://www.topsan.org/Proteins/SECSG/1t9f TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O61793_CAEEL O61793_CAEEL] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t9/1t9f_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t9f ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Caenorhabditis elegans]] | [[Category: Caenorhabditis elegans]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Arabashi | + | [[Category: Arabashi A]] |
| - | [[Category: Bunzel | + | [[Category: Bunzel R]] |
| - | [[Category: DeLucas | + | [[Category: DeLucas L]] |
| - | [[Category: Gray | + | [[Category: Gray R]] |
| - | [[Category: Huang | + | [[Category: Huang WY]] |
| - | [[Category: Li | + | [[Category: Li S]] |
| - | [[Category: Lu | + | [[Category: Lu S]] |
| - | [[Category: Luan | + | [[Category: Luan CH]] |
| - | [[Category: Luo | + | [[Category: Luo D]] |
| - | [[Category: Luo | + | [[Category: Luo M]] |
| - | [[Category: Qiu | + | [[Category: Qiu S]] |
| - | + | [[Category: Schormann N]] | |
| - | [[Category: Schormann | + | [[Category: Symersky J]] |
| - | [[Category: Symersky | + | [[Category: Tsao J]] |
| - | [[Category: Tsao | + | [[Category: Zhang Y]] |
| - | [[Category: Zhang | + | |
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Current revision
Structural genomics of Caenorhabditis elegans: Structure of a protein with unknown function
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Categories: Caenorhabditis elegans | Large Structures | Arabashi A | Bunzel R | DeLucas L | Gray R | Huang WY | Li S | Lu S | Luan CH | Luo D | Luo M | Qiu S | Schormann N | Symersky J | Tsao J | Zhang Y
