This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2aqq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:23, 3 April 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2aqq' size='340' side='right'caption='[[2aqq]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='2aqq' size='340' side='right'caption='[[2aqq]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2aqq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"diplokokkus_intracellularis_meningitidis"_(sic)_weichselbaum_1887 "diplokokkus intracellularis meningitidis" (sic) weichselbaum 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2aqq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2aqm|2aqm]], [[2aqn|2aqn]], [[2aqp|2aqp]], [[2aqr|2aqr]], [[2aqs|2aqs]], [[2aqt|2aqt]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sodC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 "Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqq OCA], [https://pdbe.org/2aqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqq RCSB], [https://www.ebi.ac.uk/pdbsum/2aqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqq OCA], [https://pdbe.org/2aqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqq RCSB], [https://www.ebi.ac.uk/pdbsum/2aqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/SODC_NEIMB SODC_NEIMB]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).
+
[https://www.uniprot.org/uniprot/SODC_NEIMA SODC_NEIMA] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 28: Line 26:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Neisseria meningitidis]]
-
[[Category: Bruns, C K]]
+
[[Category: Bruns CK]]
-
[[Category: Cabelli, D E]]
+
[[Category: Cabelli DE]]
-
[[Category: Cao, Z]]
+
[[Category: Cao Z]]
-
[[Category: DiDonato, M]]
+
[[Category: DiDonato M]]
-
[[Category: Getzoff, E D]]
+
[[Category: Getzoff ED]]
-
[[Category: Kassmann, C J]]
+
[[Category: Kassmann CJ]]
-
[[Category: Kroll, J S]]
+
[[Category: Kroll JS]]
-
[[Category: Tabatabai, L B]]
+
[[Category: Tabatabai LB]]
-
[[Category: Cu/zn superoxide dismutase]]
+
-
[[Category: Electrostatic guidance]]
+
-
[[Category: Neisseria meningitidi]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

CU/ZN superoxid dismutate from neisseria meningitidis K91E mutant

PDB ID 2aqq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2aqq"
Personal tools