This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2g3i
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:2g3i.png|left|200px]] | ||
| - | + | ==Structure of S.olivaceoviridis xylanase Q88A/R275A mutant== | |
| - | + | <StructureSection load='2g3i' size='340' side='right'caption='[[2g3i]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2g3i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_olivaceoviridis Streptomyces olivaceoviridis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G3I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G3I FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g3i OCA], [https://pdbe.org/2g3i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g3i RCSB], [https://www.ebi.ac.uk/pdbsum/2g3i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g3i ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q7SI98_STROI Q7SI98_STROI] | |
| - | + | == Evolutionary Conservation == | |
| - | == | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | [[ | + | <jmolCheckbox> |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g3/2g3i_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g3i ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Streptomyces olivaceoviridis]] | [[Category: Streptomyces olivaceoviridis]] | ||
| - | [[Category: Diertavitian | + | [[Category: Diertavitian S]] |
| - | [[Category: Fujimoto | + | [[Category: Fujimoto Z]] |
| - | [[Category: Johansson | + | [[Category: Johansson E]] |
| - | [[Category: Kaneko | + | [[Category: Kaneko S]] |
| - | [[Category: Kuno | + | [[Category: Kuno A]] |
| - | [[Category: Leggio | + | [[Category: Lo Leggio L]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
| |||||||||||
