This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3st0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:44, 3 April 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3st0| PDB=3st0 | SCENE= }}
 
-
===Engineered medium-affinity halide-binding protein derived from YFP: halide-free===
 
-
{{ABSTRACT_PUBMED_24107961}}
 
-
==Function==
+
==Engineered medium-affinity halide-binding protein derived from YFP: halide-free==
-
[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
+
<StructureSection load='3st0' size='340' side='right'caption='[[3st0]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3st0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ST0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ST0 FirstGlance]. <br>
-
[[3st0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ST0 OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.19&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3st0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3st0 OCA], [https://pdbe.org/3st0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3st0 RCSB], [https://www.ebi.ac.uk/pdbsum/3st0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3st0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
==See Also==
==See Also==
-
*[[Green Fluorescent Protein|Green Fluorescent Protein]]
+
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:024107961</ref><references group="xtra"/><references/>
+
[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
-
[[Category: Beese, L S.]]
+
[[Category: Large Structures]]
-
[[Category: Grimley, J S.]]
+
[[Category: Beese LS]]
-
[[Category: Hellinga, H W.]]
+
[[Category: Grimley JS]]
-
[[Category: Wang, W.]]
+
[[Category: Hellinga HW]]
-
[[Category: Beta barrel]]
+
[[Category: Wang W]]
-
[[Category: Halide binding protein]]
+
-
[[Category: Imaging reagent]]
+
-
[[Category: Luminescent protein]]
+
-
[[Category: Yellow fluorescent protein]]
+

Current revision

Engineered medium-affinity halide-binding protein derived from YFP: halide-free

PDB ID 3st0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools