This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4gxh
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004== | ==Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004== | ||
| - | <StructureSection load='4gxh' size='340' side='right' caption='[[4gxh]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='4gxh' size='340' side='right'caption='[[4gxh]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4gxh]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4gxh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xenorhabdus_bovienii_SS-2004 Xenorhabdus bovienii SS-2004]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GXH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GXH FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gxh OCA], [https://pdbe.org/4gxh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gxh RCSB], [https://www.ebi.ac.uk/pdbsum/4gxh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gxh ProSAT]</span></td></tr> | |
| - | + | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/D3V0W1_XENBS D3V0W1_XENBS] Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).[HAMAP-Rule:MF_00417][SAAS:SAAS000816_004_005679] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Xenorhabdus bovienii]] | + | [[Category: Xenorhabdus bovienii SS-2004]] |
| - | [[Category: Almo | + | [[Category: Almo SC]] |
| - | [[Category: Ghosh | + | [[Category: Ghosh A]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004
| |||||||||||
