This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ic6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:46, 3 April 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ic6.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF A SERINE PROTEASE PROTEINASE K FROM TRITIRACHIUM ALBUM LIMBER AT 0.98 A RESOLUTION==
-
The line below this paragraph, containing "STRUCTURE_1ic6", creates the "Structure Box" on the page.
+
<StructureSection load='1ic6' size='340' side='right'caption='[[1ic6]], [[Resolution|resolution]] 0.98&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ic6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Parengyodontium_album Parengyodontium album]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IC6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.98&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
{{STRUCTURE_1ic6| PDB=1ic6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ic6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ic6 OCA], [https://pdbe.org/1ic6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ic6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ic6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ic6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRTK_PARAQ PRTK_PARAQ] Hydrolyzes keratin at aromatic and hydrophobic residues.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/1ic6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ic6 ConSurf].
 +
<div style="clear:both"></div>
-
===STRUCTURE OF A SERINE PROTEASE PROTEINASE K FROM TRITIRACHIUM ALBUM LIMBER AT 0.98 A RESOLUTION===
+
==See Also==
-
 
+
*[[Proteinase 3D structures|Proteinase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11258922}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11258922 is the PubMed ID number.
+
[[Category: Parengyodontium album]]
-
-->
+
[[Category: Betzel C]]
-
{{ABSTRACT_PUBMED_11258922}}
+
[[Category: Eschenburg S]]
-
 
+
[[Category: Gourinath S]]
-
==About this Structure==
+
[[Category: Kaur P]]
-
1IC6 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Engyodontium_album Engyodontium album]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IC6 OCA].
+
[[Category: Kumar P]]
-
 
+
[[Category: Perbandt M]]
-
==Reference==
+
[[Category: Singh TP]]
-
<ref group="xtra">PMID:11258922</ref><references group="xtra"/>
+
-
[[Category: Engyodontium album]]
+
-
[[Category: Peptidase K]]
+
-
[[Category: Betzel, C.]]
+
-
[[Category: Eschenburg, S.]]
+
-
[[Category: Gourinath, S.]]
+
-
[[Category: Kaur, P.]]
+
-
[[Category: Kumar, P.]]
+
-
[[Category: Perbandt, M.]]
+
-
[[Category: Singh, T P.]]
+
-
[[Category: Proteinase k]]
+
-
[[Category: Serine protease]]
+
-
[[Category: Structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 07:41:28 2009''
+

Current revision

STRUCTURE OF A SERINE PROTEASE PROTEINASE K FROM TRITIRACHIUM ALBUM LIMBER AT 0.98 A RESOLUTION

PDB ID 1ic6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ic6"
Personal tools