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1j8i

From Proteopedia

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{{Seed}}
 
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[[Image:1j8i.png|left|200px]]
 
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<!--
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==Solution Structure of Human Lymphotactin==
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The line below this paragraph, containing "STRUCTURE_1j8i", creates the "Structure Box" on the page.
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<StructureSection load='1j8i' size='340' side='right'caption='[[1j8i]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1j8i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J8I FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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-->
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j8i OCA], [https://pdbe.org/1j8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j8i RCSB], [https://www.ebi.ac.uk/pdbsum/1j8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j8i ProSAT]</span></td></tr>
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{{STRUCTURE_1j8i| PDB=1j8i | SCENE= }}
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</table>
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== Function ==
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===Solution Structure of Human Lymphotactin===
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[https://www.uniprot.org/uniprot/XCL1_HUMAN XCL1_HUMAN] Chemotactic activity for lymphocytes but not for monocytes or neutrophils.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_11601972}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 11601972 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/1j8i_consurf.spt"</scriptWhenChecked>
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-->
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_11601972}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j8i ConSurf].
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1J8I is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J8I OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:11601972</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Kuloglu, E S.]]
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[[Category: Large Structures]]
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[[Category: Markley, J L.]]
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[[Category: Kuloglu ES]]
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[[Category: McCaslin, D R.]]
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[[Category: Markley JL]]
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[[Category: Pauza, C D.]]
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[[Category: McCaslin DR]]
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[[Category: Volkman, B F.]]
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[[Category: Pauza CD]]
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[[Category: Chemokine]]
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[[Category: Volkman BF]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 07:10:07 2009''
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Current revision

Solution Structure of Human Lymphotactin

PDB ID 1j8i

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