This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jer

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:51, 3 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jer.png|left|200px]]
 
-
{{STRUCTURE_1jer| PDB=1jer | SCENE= }}
+
==CUCUMBER STELLACYANIN, CU2+, PH 7.0==
-
 
+
<StructureSection load='1jer' size='340' side='right'caption='[[1jer]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===CUCUMBER STELLACYANIN, CU2+, PH 7.0===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jer]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucumis_sativus Cucumis sativus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JER FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_8931136}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jer OCA], [https://pdbe.org/1jer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jer RCSB], [https://www.ebi.ac.uk/pdbsum/1jer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jer ProSAT]</span></td></tr>
-
[[1jer]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cucumis_sativus Cucumis sativus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JER OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/CPC_CUCSA CPC_CUCSA]
-
<ref group="xtra">PMID:008931136</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/1jer_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jer ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Cucumis sativus]]
[[Category: Cucumis sativus]]
-
[[Category: Eisenberg, D.]]
+
[[Category: Large Structures]]
-
[[Category: Hart, P J.]]
+
[[Category: Eisenberg D]]
-
[[Category: Herrmann, R G.]]
+
[[Category: Hart PJ]]
-
[[Category: Nalbandyan, R M.]]
+
[[Category: Herrmann RG]]
-
[[Category: Nersissian, A M.]]
+
[[Category: Nalbandyan RM]]
-
[[Category: Valentine, J S.]]
+
[[Category: Nersissian AM]]
-
[[Category: Electron transport]]
+
[[Category: Valentine JS]]
-
[[Category: Glycoprotein]]
+
-
[[Category: Hydroxylation]]
+

Current revision

CUCUMBER STELLACYANIN, CU2+, PH 7.0

PDB ID 1jer

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools