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1jmp

From Proteopedia

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[[Image:1jmp.gif|left|200px]]
 
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{{Structure
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==Solution Structure of the Viscotoxin B==
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|PDB= 1jmp |SIZE=350|CAPTION= <scene name='initialview01'>1jmp</scene>
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<StructureSection load='1jmp' size='340' side='right'caption='[[1jmp]]' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[1jmp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Viscum_album Viscum album]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JMP FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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|GENE=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jmp OCA], [https://pdbe.org/1jmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jmp RCSB], [https://www.ebi.ac.uk/pdbsum/1jmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jmp ProSAT]</span></td></tr>
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}}
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</table>
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== Function ==
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'''Solution Structure of the Viscotoxin B'''
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[https://www.uniprot.org/uniprot/THNB_VISAL THNB_VISAL] Thionins are small plant proteins which are toxic to animal cells. They seem to exert their toxic effect at the level of the cell membrane. Their precise function is not known.[REFERENCE:3]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==Overview==
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Check<jmol>
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Viscotoxins A2 (VA2) and B (VB) are, together with viscotoxin A3 (VA3), among the most abundant viscotoxin isoforms that occur in mistletoe-derived medicines used in anti-cancer therapy. Although these isoforms have a high degree of amino-acid-sequence similarity, they are strikingly different from each other in their in vitro cytotoxic potency towards tumour cells. First, as VA3 is the only viscotoxin whose three-dimensional (3D) structure has been solved to date, we report the NMR determination of the 3D structures of VA2 and VB. Secondly, to account for the in vitro cytotoxicity discrepancy, we carried out a comparative study of the interaction of the three viscotoxins with model membranes. Although the overall 3D structure is highly conserved among the three isoforms, some discrete structural features and associated surface properties readily account for the different affinity and perturbation of model membranes. VA3 and VA2 interact in a similar way, but the weaker hydrophobic character of VA2 is thought to be mainly responsible for the apparent different affinity towards membranes. VB is much less active than the other two viscotoxins and does not insert into model membranes. This could be related to the occurrence of a single residue (Arg25) protruding outside the hydrophobic plane formed by the two amphipathic alpha-helices, through which viscotoxins are supposed to interact with plasma membranes.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jm/1jmp_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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1JMP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Viscum_album Viscum album]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JMP OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==Reference==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jmp ConSurf].
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Comparative membrane interaction study of viscotoxins A3, A2 and B from mistletoe (Viscum album) and connections with their structures., Coulon A, Mosbah A, Lopez A, Sautereau AM, Schaller G, Urech K, Rouge P, Darbon H, Biochem J. 2003 Aug 15;374(Pt 1):71-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12733989 12733989]
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<div style="clear:both"></div>
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[[Category: Single protein]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Viscum album]]
[[Category: Viscum album]]
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[[Category: Bernard, C.]]
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[[Category: Bernard C]]
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[[Category: Coulon, A.]]
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[[Category: Coulon A]]
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[[Category: Darbon, H.]]
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[[Category: Darbon H]]
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[[Category: Mosbah, A.]]
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[[Category: Mosbah A]]
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[[Category: Rouge, P.]]
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[[Category: Rouge P]]
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[[Category: Urech, K.]]
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[[Category: Urech K]]
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[[Category: nmr]]
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[[Category: thionin]]
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[[Category: viscotoxin]]
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[[Category: viscum album]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:05:29 2008''
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Current revision

Solution Structure of the Viscotoxin B

PDB ID 1jmp

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