This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1l8f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:07, 3 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1l8f.png|left|200px]]
 
-
<!--
+
==Structure of 20K-endoglucanase from Melanocarpus albomyces at 1.8 A==
-
The line below this paragraph, containing "STRUCTURE_1l8f", creates the "Structure Box" on the page.
+
<StructureSection load='1l8f' size='340' side='right'caption='[[1l8f]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1l8f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Melanocarpus_albomyces Melanocarpus albomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L8F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l8f OCA], [https://pdbe.org/1l8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l8f RCSB], [https://www.ebi.ac.uk/pdbsum/1l8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l8f ProSAT]</span></td></tr>
-
{{STRUCTURE_1l8f| PDB=1l8f | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8J0K8_MELAO Q8J0K8_MELAO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/1l8f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1l8f ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of 20K-endoglucanase from Melanocarpus albomyces at 1.8 A===
+
==See Also==
-
 
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12657806}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12657806 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12657806}}
+
-
 
+
-
==About this Structure==
+
-
1L8F is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Melanocarpus_albomyces Melanocarpus albomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L8F OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12657806</ref><references group="xtra"/>
+
-
[[Category: Cellulase]]
+
[[Category: Melanocarpus albomyces]]
[[Category: Melanocarpus albomyces]]
-
[[Category: Rouvinen, J.]]
+
[[Category: Rouvinen J]]
-
[[Category: Valjakka, J.]]
+
[[Category: Valjakka J]]
-
[[Category: Cellulase]]
+
-
[[Category: Endoglucanase]]
+
-
[[Category: Thermophilic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:31:33 2009''
+

Current revision

Structure of 20K-endoglucanase from Melanocarpus albomyces at 1.8 A

PDB ID 1l8f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools