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1lkc

From Proteopedia

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{{Seed}}
 
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[[Image:1lkc.png|left|200px]]
 
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==Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica==
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The line below this paragraph, containing "STRUCTURE_1lkc", creates the "Structure Box" on the page.
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<StructureSection load='1lkc' size='340' side='right'caption='[[1lkc]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1lkc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica Salmonella enterica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1kus 1kus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LKC FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_1lkc| PDB=1lkc | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lkc OCA], [https://pdbe.org/1lkc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lkc RCSB], [https://www.ebi.ac.uk/pdbsum/1lkc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lkc ProSAT]</span></td></tr>
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</table>
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===Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica===
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== Function ==
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[https://www.uniprot.org/uniprot/COBD_SALTY COBD_SALTY] Decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin.<ref>PMID:9446573</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 11939774 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lk/1lkc_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_11939774}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1LKC is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica Salmonella enterica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1kus 1kus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LKC OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lkc ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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<ref group="xtra">PMID:11939774</ref><references group="xtra"/>
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Salmonella enterica]]
[[Category: Salmonella enterica]]
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[[Category: Bauer, C B.]]
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[[Category: Bauer CB]]
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[[Category: Brushaber, K R.]]
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[[Category: Brushaber KR]]
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[[Category: Cheong, C G.]]
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[[Category: Cheong CG]]
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[[Category: Escalante-Semerena, J C.]]
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[[Category: Escalante-Semerena JC]]
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[[Category: Rayment, I.]]
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[[Category: Rayment I]]
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[[Category: 1-amino-2-propanol-phosphate]]
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[[Category: Cobalamin]]
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[[Category: Cobd]]
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[[Category: Decarboxylase]]
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[[Category: L-threonine-o-3-phosphate]]
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[[Category: Lyase]]
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[[Category: Plp]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 27 19:45:29 2010''
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Current revision

Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica

PDB ID 1lkc

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