This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1it9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:07, 10 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1it9.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A==
-
The line below this paragraph, containing "STRUCTURE_1it9", creates the "Structure Box" on the page.
+
<StructureSection load='1it9' size='340' side='right'caption='[[1it9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1it9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IT9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IT9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1it9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1it9 OCA], [https://pdbe.org/1it9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1it9 RCSB], [https://www.ebi.ac.uk/pdbsum/1it9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1it9 ProSAT]</span></td></tr>
-
{{STRUCTURE_1it9| PDB=1it9 | SCENE= }}
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/1it9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1it9 ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A===
+
==See Also==
-
 
+
*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12499636}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12499636 is the PubMed ID number.
+
[[Category: Mus musculus]]
-
-->
+
[[Category: Hanzawa H]]
-
{{ABSTRACT_PUBMED_12499636}}
+
[[Category: Haruyama H]]
-
 
+
[[Category: Hata T]]
-
==About this Structure==
+
[[Category: Ito S]]
-
1IT9 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus_and_homo_sapiens Mus musculus and homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IT9 OCA].
+
[[Category: Miyadai K]]
-
 
+
[[Category: Serizawa N]]
-
==Reference==
+
[[Category: Takahashi T]]
-
<ref group="xtra">PMID:12499636</ref><references group="xtra"/>
+
[[Category: Takayama T]]
-
[[Category: Mus musculus and homo sapiens]]
+
-
[[Category: Hanzawa, H.]]
+
-
[[Category: Haruyama, H.]]
+
-
[[Category: Hata, T.]]
+
-
[[Category: Ito, S.]]
+
-
[[Category: Miyadai, K.]]
+
-
[[Category: Serizawa, N.]]
+
-
[[Category: Takahashi, T.]]
+
-
[[Category: Takayama, T.]]
+
-
[[Category: Agonistic_antibody]]
+
-
[[Category: Anti_fa]]
+
-
[[Category: Antibody_humanization]]
+
-
[[Category: Apoptosis]]
+
-
[[Category: Fab]]
+
-
[[Category: Immunoglobulin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:27:20 2009''
+

Current revision

CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A

PDB ID 1it9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools