This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1lqe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:26, 10 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1lqe.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF TRYPSIN IN COMPLEX WITH 79.==
-
The line below this paragraph, containing "STRUCTURE_1lqe", creates the "Structure Box" on the page.
+
<StructureSection load='1lqe' size='340' side='right'caption='[[1lqe]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1lqe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LQE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IMA:[4-({[5-BENZYLOXY-1-(3-CARBAMIMIDOYL-BENZYL)-1H-INDOLE-2-CARBONYL]-AMINO}-METHYL)-PHENYL]-TRIMETHYL-AMMONIUM'>IMA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1lqe| PDB=1lqe | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqe OCA], [https://pdbe.org/1lqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lqe RCSB], [https://www.ebi.ac.uk/pdbsum/1lqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lqe ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lq/1lqe_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lqe ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF TRYPSIN IN COMPLEX WITH 79.===
+
==See Also==
-
 
+
*[[Trypsin 3D structures|Trypsin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12061878}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 12061878 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12061878}}
+
-
 
+
-
==About this Structure==
+
-
1LQE is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LQE OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12061878</ref><references group="xtra"/>
+
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Trypsin]]
+
[[Category: Large Structures]]
-
[[Category: Liesum, A.]]
+
[[Category: Liesum A]]
-
[[Category: Schreuder, H A.]]
+
[[Category: Schreuder HA]]
-
[[Category: Blood coagulation factor]]
+
-
[[Category: Enzyme-inhibitor complex]]
+
-
[[Category: Factor xa inhibitor]]
+
-
[[Category: Serine proteinase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:14:50 2009''
+

Current revision

CRYSTAL STRUCTURE OF TRYPSIN IN COMPLEX WITH 79.

PDB ID 1lqe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1lqe"
Personal tools