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1lyk

From Proteopedia

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[[Image:1lyk.png|left|200px]]
 
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==THE IMPACT OF THE PHYSICAL AND CHEMICAL ENVIROMENT ON THE MOLECULAR STRUCTURE OF COPRINUS CINEREUS PEROXIDASE==
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The line below this paragraph, containing "STRUCTURE_1lyk", creates the "Structure Box" on the page.
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<StructureSection load='1lyk' size='340' side='right'caption='[[1lyk]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1lyk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Coprinopsis_cinerea Coprinopsis cinerea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LYK FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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{{STRUCTURE_1lyk| PDB=1lyk | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lyk OCA], [https://pdbe.org/1lyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lyk RCSB], [https://www.ebi.ac.uk/pdbsum/1lyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lyk ProSAT]</span></td></tr>
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</table>
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===THE IMPACT OF THE PHYSICAL AND CHEMICAL ENVIROMENT ON THE MOLECULAR STRUCTURE OF COPRINUS CINEREUS PEROXIDASE===
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== Function ==
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[https://www.uniprot.org/uniprot/PER_COPCI PER_COPCI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12777760}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12777760 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/1lyk_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12777760}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[1lyk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Coprinopsis_cinerea Coprinopsis cinerea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LYK OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lyk ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:012777760</ref><references group="xtra"/>
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</StructureSection>
[[Category: Coprinopsis cinerea]]
[[Category: Coprinopsis cinerea]]
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[[Category: Peroxidase]]
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[[Category: Large Structures]]
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[[Category: Harris, P.]]
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[[Category: Harris P]]
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[[Category: Houborg, K.]]
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[[Category: Houborg K]]
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[[Category: Larsen, S.]]
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[[Category: Larsen S]]
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[[Category: Petersen, J F.W.]]
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[[Category: Petersen JFW]]
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[[Category: Poulsen, J C.N.]]
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[[Category: Poulsen J-CN]]
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[[Category: Rowland, P.]]
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[[Category: Rowland P]]
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[[Category: Schneider, P.]]
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[[Category: Schneider P]]
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[[Category: Vind, J.]]
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[[Category: Vind J]]
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[[Category: Coprinus cinereus]]
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[[Category: Mutant]]
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[[Category: Oxidoreductase]]
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[[Category: Peroxidase]]
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[[Category: Thermostability]]
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Current revision

THE IMPACT OF THE PHYSICAL AND CHEMICAL ENVIROMENT ON THE MOLECULAR STRUCTURE OF COPRINUS CINEREUS PEROXIDASE

PDB ID 1lyk

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