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1m0l

From Proteopedia

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{{Seed}}
 
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[[Image:1m0l.png|left|200px]]
 
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==BACTERIORHODOPSIN/LIPID COMPLEX AT 1.47 A RESOLUTION==
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The line below this paragraph, containing "STRUCTURE_1m0l", creates the "Structure Box" on the page.
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<StructureSection load='1m0l' size='340' side='right'caption='[[1m0l]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1m0l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M0L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M0L FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.47&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI1:1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL'>LI1</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene></td></tr>
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{{STRUCTURE_1m0l| PDB=1m0l | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m0l OCA], [https://pdbe.org/1m0l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m0l RCSB], [https://www.ebi.ac.uk/pdbsum/1m0l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m0l ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m0/1m0l_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m0l ConSurf].
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<div style="clear:both"></div>
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===BACTERIORHODOPSIN/LIPID COMPLEX AT 1.47 A RESOLUTION===
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==See Also==
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*[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12206785}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 12206785 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12206785}}
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==About this Structure==
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1M0L is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M0L OCA].
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==Reference==
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Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal., Schobert B, Cupp-Vickery J, Hornak V, Smith S, Lanyi J, J Mol Biol. 2002 Aug 23;321(4):715-26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12206785 12206785]
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[[Category: Halobacterium salinarum]]
[[Category: Halobacterium salinarum]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Lanyi, J K.]]
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[[Category: Lanyi JK]]
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[[Category: 7-transmembrane]]
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[[Category: Haloarchaea]]
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[[Category: Ion pump]]
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[[Category: Lipid]]
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[[Category: Membrane protein]]
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[[Category: Merohedral twinning]]
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[[Category: Photoreceptor]]
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[[Category: Retinal protein]]
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[[Category: Serpentine]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 22:57:08 2008''
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Current revision

BACTERIORHODOPSIN/LIPID COMPLEX AT 1.47 A RESOLUTION

PDB ID 1m0l

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