This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1mqa
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:1mqa.png|left|200px]] | ||
| - | < | + | ==Crystal structure of high affinity alphaL I domain in the absence of ligand or metal== |
| - | + | <StructureSection load='1mqa' size='340' side='right'caption='[[1mqa]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1mqa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MQA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MQA FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | |
| - | --> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mqa OCA], [https://pdbe.org/1mqa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mqa RCSB], [https://www.ebi.ac.uk/pdbsum/1mqa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mqa ProSAT]</span></td></tr> |
| - | + | </table> | |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ITAL_HUMAN ITAL_HUMAN] Integrin alpha-L/beta-2 is a receptor for ICAM1, ICAM2, ICAM3 and ICAM4. It is involved in a variety of immune phenomena including leukocyte-endothelial cell interaction, cytotoxic T-cell mediated killing, and antibody dependent killing by granulocytes and monocytes. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mq/1mqa_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mqa ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Integrin 3D structures|Integrin 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | < | + | |
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Dong | + | [[Category: Large Structures]] |
| - | [[Category: Jun | + | [[Category: Dong Y]] |
| - | [[Category: Liu | + | [[Category: Jun C-D]] |
| - | [[Category: Shimaoka | + | [[Category: Liu J-H]] |
| - | [[Category: Springer | + | [[Category: Shimaoka T]] |
| - | [[Category: Takagi | + | [[Category: Springer TA]] |
| - | [[Category: Wang | + | [[Category: Takagi J]] |
| - | [[Category: Xiao | + | [[Category: Wang J-H]] |
| - | [[Category: Yang | + | [[Category: Xiao T]] |
| - | [[Category: Zhang | + | [[Category: Yang Y]] |
| - | + | [[Category: Zhang R]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of high affinity alphaL I domain in the absence of ligand or metal
| |||||||||||
Categories: Homo sapiens | Large Structures | Dong Y | Jun C-D | Liu J-H | Shimaoka T | Springer TA | Takagi J | Wang J-H | Xiao T | Yang Y | Zhang R

