This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1mr4
From Proteopedia
(Difference between revisions)
| (9 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1mr4.png|left|200px]] | ||
| - | + | ==Solution Structure of NaD1 from Nicotiana alata== | |
| - | + | <StructureSection load='1mr4' size='340' side='right'caption='[[1mr4]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1mr4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MR4 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mr4 OCA], [https://pdbe.org/1mr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mr4 RCSB], [https://www.ebi.ac.uk/pdbsum/1mr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mr4 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/DEF_TOBAC DEF_TOBAC] Involved in floral organogenesis. May play a protective role in flowers by protecting the reproductive organs from potential pathogen attack. | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | < | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mr/1mr4_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mr4 ConSurf]. |
| - | [[1mr4]] is a 1 chain structure | + | <div style="clear:both"></div> |
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Defensin 3D structures|Defensin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Nicotiana tabacum]] | [[Category: Nicotiana tabacum]] | ||
| - | [[Category: Anderson | + | [[Category: Anderson MA]] |
| - | [[Category: Craik | + | [[Category: Craik DJ]] |
| - | [[Category: Lay | + | [[Category: Lay FT]] |
| - | [[Category: Scanlon | + | [[Category: Scanlon MJ]] |
| - | [[Category: Schirra | + | [[Category: Schirra HJ]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution Structure of NaD1 from Nicotiana alata
| |||||||||||

