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1mzp
From Proteopedia
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| - | [[Image:1mzp.png|left|200px]] | ||
| - | + | ==Structure of the L1 protuberance in the ribosome== | |
| - | + | <StructureSection load='1mzp' size='340' side='right'caption='[[1mzp]], [[Resolution|resolution]] 2.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1mzp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MZP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mzp OCA], [https://pdbe.org/1mzp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mzp RCSB], [https://www.ebi.ac.uk/pdbsum/1mzp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mzp ProSAT]</span></td></tr> |
| - | [[1mzp]] is a 2 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RL1_SULAC RL1_SULAC] Probably involved in E site tRNA release (By similarity). Binds directly to 23S rRNA. Protein L1 is also a translational repressor protein, it controls the translation of its operon by binding to its mRNA (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mz/1mzp_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mzp ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Ribosomal protein L1|Ribosomal protein L1]] | *[[Ribosomal protein L1|Ribosomal protein L1]] | ||
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Sulfolobus acidocaldarius]] | [[Category: Sulfolobus acidocaldarius]] | ||
| - | [[Category: Davydova | + | [[Category: Davydova N]] |
| - | [[Category: Eliseikina | + | [[Category: Eliseikina I]] |
| - | [[Category: Garber | + | [[Category: Garber M]] |
| - | [[Category: Liljas | + | [[Category: Liljas A]] |
| - | [[Category: Nevskaya | + | [[Category: Nevskaya N]] |
| - | [[Category: Nikonov | + | [[Category: Nikonov S]] |
| - | [[Category: Nikulin | + | [[Category: Nikulin A]] |
| - | [[Category: Piendl | + | [[Category: Piendl W]] |
| - | [[Category: Platonova | + | [[Category: Platonova O]] |
| - | [[Category: Selmer | + | [[Category: Selmer M]] |
| - | [[Category: Tishchenko | + | [[Category: Tishchenko S]] |
| - | [[Category: Zimmermann | + | [[Category: Zimmermann R]] |
| - | + | ||
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Current revision
Structure of the L1 protuberance in the ribosome
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