This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n10

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:44, 10 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1n10.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen==
-
The line below this paragraph, containing "STRUCTURE_1n10", creates the "Structure Box" on the page.
+
<StructureSection load='1n10' size='340' side='right'caption='[[1n10]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1n10]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Phleum_pratense Phleum pratense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N10 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_1n10| PDB=1n10 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n10 OCA], [https://pdbe.org/1n10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n10 RCSB], [https://www.ebi.ac.uk/pdbsum/1n10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n10 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1n10 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/MPAP1_PHLPR MPAP1_PHLPR]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1N10 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Phleum_pratense Phleum pratense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N10 OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n1/1n10_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n10 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Phleum pratense]]
[[Category: Phleum pratense]]
-
[[Category: Single protein]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C.]]
+
[[Category: Ball T]]
-
[[Category: Ball, T.]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Fedorov AA]]
-
[[Category: Fedorov, A A.]]
+
[[Category: Leistler B]]
-
[[Category: Leistler, B.]]
+
[[Category: Valenta R]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: Valenta, R.]]
+
-
[[Category: Double-psi beta barrel]]
+
-
[[Category: Expansin]]
+
-
[[Category: Immunoglobulin-like fold]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Phl p 1]]
+
-
[[Category: Plant allergen]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 21:03:23 2008''
+

Current revision

Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen

PDB ID 1n10

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools