This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


8qk2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:28, 17 April 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8qk2 is ON HOLD until Paper Publication
+
==Structure of K.pneumoniae LpxH in complex with EBL-3339==
-
 
+
<StructureSection load='8qk2' size='340' side='right'caption='[[8qk2]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
Authors: Sooriyaarachchi, S., Bergfors, T., Jones, T.A., Mowbray, S.L.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[8qk2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8QK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8QK2 FirstGlance]. <br>
-
Description: Structure of K.pneumoniae LpxH in complex with EBL-3339
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=VTF:~{N}-[4-[4-(4-cyano-6-methyl-pyrimidin-2-yl)piperazin-1-yl]sulfonylphenyl]-2-[methyl(methylsulfonyl)amino]benzamide'>VTF</scene></td></tr>
-
[[Category: Bergfors, T]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8qk2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8qk2 OCA], [https://pdbe.org/8qk2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8qk2 RCSB], [https://www.ebi.ac.uk/pdbsum/8qk2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8qk2 ProSAT]</span></td></tr>
-
[[Category: Jones, T.A]]
+
</table>
-
[[Category: Mowbray, S.L]]
+
== Function ==
-
[[Category: Sooriyaarachchi, S]]
+
[https://www.uniprot.org/uniprot/LPXH_KLEP7 LPXH_KLEP7] Hydrolyzes the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.[HAMAP-Rule:MF_00575]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Klebsiella pneumoniae]]
 +
[[Category: Large Structures]]
 +
[[Category: Bergfors T]]
 +
[[Category: Jones TA]]
 +
[[Category: Mowbray SL]]
 +
[[Category: Sooriyaarachchi S]]

Current revision

Structure of K.pneumoniae LpxH in complex with EBL-3339

PDB ID 8qk2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools