This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1orl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:50, 17 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1orl.png|left|200px]]
 
-
<!--
+
==1H NMR structure determination of Viscotoxin C1==
-
The line below this paragraph, containing "STRUCTURE_1orl", creates the "Structure Box" on the page.
+
<StructureSection load='1orl' size='340' side='right'caption='[[1orl]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1orl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Viscum_album Viscum album]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ORL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1orl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1orl OCA], [https://pdbe.org/1orl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1orl RCSB], [https://www.ebi.ac.uk/pdbsum/1orl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1orl ProSAT]</span></td></tr>
-
{{STRUCTURE_1orl| PDB=1orl | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===1H NMR structure determination of Viscotoxin C1===
+
[https://www.uniprot.org/uniprot/THNC_VISAL THNC_VISAL]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14580196}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 14580196 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/or/1orl_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_14580196}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1orl ConSurf].
-
1ORL is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Viscum_album Viscum album]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORL OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:14580196</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Viscum album]]
[[Category: Viscum album]]
-
[[Category: Catalano, M.]]
+
[[Category: Catalano M]]
-
[[Category: Fogolari, F.]]
+
[[Category: Fogolari F]]
-
[[Category: Giannattasio, M.]]
+
[[Category: Giannattasio M]]
-
[[Category: Molinari, H.]]
+
[[Category: Molinari H]]
-
[[Category: Ragona, L.]]
+
[[Category: Ragona L]]
-
[[Category: Romagnoli, S.]]
+
[[Category: Romagnoli S]]
-
[[Category: Urech, K.]]
+
[[Category: Urech K]]
-
[[Category: Beta-sheet]]
+
-
[[Category: Concentric motif of disulphide bridge]]
+
-
[[Category: Helix-turn-helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:42:47 2009''
+

Current revision

1H NMR structure determination of Viscotoxin C1

PDB ID 1orl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1orl"
Personal tools