This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ou0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:50, 17 April 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ou0.gif|left|200px]]
 
-
{{Structure
+
==precorrin-8X methylmutase related protein==
-
|PDB= 1ou0 |SIZE=350|CAPTION= <scene name='initialview01'>1ou0</scene>, resolution 2.10&Aring;
+
<StructureSection load='1ou0' size='340' side='right'caption='[[1ou0]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[1ou0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OU0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OU0 FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Precorrin-8X_methylmutase Precorrin-8X methylmutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.1.2 5.4.1.2] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE= Ta0654 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2303 Thermoplasma acidophilum])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2082 CobH]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ou0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ou0 OCA], [https://pdbe.org/1ou0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ou0 RCSB], [https://www.ebi.ac.uk/pdbsum/1ou0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ou0 ProSAT], [https://www.topsan.org/Proteins/MCSG/1ou0 TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ou0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ou0 OCA], [http://www.ebi.ac.uk/pdbsum/1ou0 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1ou0 RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9HKE7_THEAC Q9HKE7_THEAC]
-
'''precorrin-8X methylmutase related protein'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
1OU0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OU0 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ou/1ou0_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
==Reference==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
Crystal structure of a predicted precorrin-8x methylmutase from Thermoplasma acidophilum., Cuff ME, Miller DJ, Korolev S, Xu X, Anderson WF, Edwards A, Joachimiak A, Savchenko A, Proteins. 2005 Feb 15;58(3):751-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15609338 15609338]
+
</jmolCheckbox>
-
[[Category: Precorrin-8X methylmutase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ou0 ConSurf].
-
[[Category: Single protein]]
+
<div style="clear:both"></div>
-
[[Category: Thermoplasma acidophilum]]
+
__TOC__
-
[[Category: Cuff, M E.]]
+
</StructureSection>
-
[[Category: Edwards, A.]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Thermoplasma acidophilum DSM 1728]]
-
[[Category: Korolev, S.]]
+
[[Category: Cuff ME]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Edwards A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: mcsg]]
+
[[Category: Korolev S]]
-
[[Category: methylmutase]]
+
[[Category: Savchenko A]]
-
[[Category: midwest center for structural genomic]]
+
-
[[Category: precorrin-8x]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:00:01 2008''
+

Current revision

precorrin-8X methylmutase related protein

PDB ID 1ou0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ou0"
Personal tools