1p7a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:53, 17 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1p7a.png|left|200px]]
 
-
<!--
+
==Solution Structure of the Third Zinc Finger from BKLF==
-
The line below this paragraph, containing "STRUCTURE_1p7a", creates the "Structure Box" on the page.
+
<StructureSection load='1p7a' size='340' side='right'caption='[[1p7a]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1p7a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P7A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P7A FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1p7a| PDB=1p7a | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p7a OCA], [https://pdbe.org/1p7a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p7a RCSB], [https://www.ebi.ac.uk/pdbsum/1p7a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p7a ProSAT]</span></td></tr>
-
 
+
</table>
-
===Solution Stucture of the Third Zinc Finger from BKLF===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/KLF3_MOUSE KLF3_MOUSE] Binds to the CACCC box of erythroid cell-expressed genes. May play a role in hematopoiesis.<ref>PMID:8657145</ref> <ref>PMID:15684403</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12736264}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12736264 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/1p7a_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12736264}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1P7A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P7A OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p7a ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
CCHX zinc finger derivatives retain the ability to bind Zn(II) and mediate protein-DNA interactions., Simpson RJ, Cram ED, Czolij R, Matthews JM, Crossley M, Mackay JP, J Biol Chem. 2003 Jul 25;278(30):28011-8. Epub 2003 May 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12736264 12736264]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Single protein]]
+
[[Category: Cram ED]]
-
[[Category: Cram, E D.]]
+
[[Category: Crossley M]]
-
[[Category: Crossley, M.]]
+
[[Category: Czolij R]]
-
[[Category: Czolij, R.]]
+
[[Category: Mackay JP]]
-
[[Category: Mackay, J P.]]
+
[[Category: Matthews JM]]
-
[[Category: Matthews, J M.]]
+
[[Category: Simpson RJY]]
-
[[Category: Simpson, R J.Y.]]
+
-
[[Category: Classical zinc finger]]
+
-
[[Category: Kruppel-like]]
+
-
[[Category: Transcription factor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 20:21:35 2008''
+

Current revision

Solution Structure of the Third Zinc Finger from BKLF

PDB ID 1p7a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools