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1pcz

From Proteopedia

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{{Seed}}
 
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[[Image:1pcz.png|left|200px]]
 
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==STRUCTURE OF TATA-BINDING PROTEIN==
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The line below this paragraph, containing "STRUCTURE_1pcz", creates the "Structure Box" on the page.
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<StructureSection load='1pcz' size='340' side='right'caption='[[1pcz]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1pcz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_woesei Pyrococcus woesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PCZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PCZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pcz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pcz OCA], [https://pdbe.org/1pcz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pcz RCSB], [https://www.ebi.ac.uk/pdbsum/1pcz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pcz ProSAT]</span></td></tr>
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{{STRUCTURE_1pcz| PDB=1pcz | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TBP_PYRWO TBP_PYRWO] General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/1pcz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pcz ConSurf].
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<div style="clear:both"></div>
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===STRUCTURE OF TATA-BINDING PROTEIN===
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==See Also==
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*[[TATA-binding protein 3D structures|TATA-binding protein 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_9000631}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9000631 is the PubMed ID number.
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{{ABSTRACT_PUBMED_9000631}}
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==About this Structure==
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1PCZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_woesei Pyrococcus woesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PCZ OCA].
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==Reference==
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The crystal structure of a hyperthermophilic archaeal TATA-box binding protein., DeDecker BS, O'Brien R, Fleming PJ, Geiger JH, Jackson SP, Sigler PB, J Mol Biol. 1996 Dec 20;264(5):1072-84. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9000631 9000631]
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[[Category: Pyrococcus woesei]]
[[Category: Pyrococcus woesei]]
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[[Category: Single protein]]
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[[Category: Dedecker BS]]
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[[Category: Dedecker, B S.]]
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[[Category: Sigler PB]]
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[[Category: Sigler, P B.]]
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[[Category: Dna-binding protein]]
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[[Category: Nuclear protein]]
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[[Category: Transcription regulation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 01:28:09 2008''
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Current revision

STRUCTURE OF TATA-BINDING PROTEIN

PDB ID 1pcz

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