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1pip
From Proteopedia
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| - | [[Image:1pip.png|left|200px]] | ||
| - | + | ==CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS== | |
| - | + | <StructureSection load='1pip' size='340' side='right'caption='[[1pip]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1pip]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PIP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PIP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NIT:4-NITROANILINE'>NIT</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pip OCA], [https://pdbe.org/1pip PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pip RCSB], [https://www.ebi.ac.uk/pdbsum/1pip PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pip ProSAT]</span></td></tr> |
| - | [[1pip]] is a 2 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PAPA1_CARPA PAPA1_CARPA] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/1pip_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pip ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Papain|Papain]] | *[[Papain|Papain]] | ||
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Carica papaya]] | [[Category: Carica papaya]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Doi | + | [[Category: Doi M]] |
| - | [[Category: Inoue | + | [[Category: Inoue M]] |
| - | [[Category: Ishida | + | [[Category: Ishida T]] |
| - | [[Category: Ohishi | + | [[Category: Ohishi H]] |
| - | [[Category: Okada | + | [[Category: Okada Y]] |
| - | [[Category: Okamoto | + | [[Category: Okamoto H]] |
| - | [[Category: Tomoo | + | [[Category: Tomoo K]] |
| - | [[Category: Tsuboi | + | [[Category: Tsuboi S]] |
| - | [[Category: Yamamoto | + | [[Category: Yamamoto A]] |
| - | [[Category: Yamamoto | + | [[Category: Yamamoto D]] |
| - | + | ||
| - | + | ||
Current revision
CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS
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Categories: Carica papaya | Large Structures | Doi M | Inoue M | Ishida T | Ohishi H | Okada Y | Okamoto H | Tomoo K | Tsuboi S | Yamamoto A | Yamamoto D
