This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1q33

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:00, 17 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1q33.png|left|200px]]
 
-
<!--
+
==Crystal structure of human ADP-ribose pyrophosphatase NUDT9==
-
The line below this paragraph, containing "STRUCTURE_1q33", creates the "Structure Box" on the page.
+
<StructureSection load='1q33' size='340' side='right'caption='[[1q33]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1q33]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q33 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q33 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1q33| PDB=1q33 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q33 OCA], [https://pdbe.org/1q33 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q33 RCSB], [https://www.ebi.ac.uk/pdbsum/1q33 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q33 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NUDT9_HUMAN NUDT9_HUMAN] Hydrolyzes ADP-ribose (ADPR) to AMP and ribose 5'-phosphate.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q3/1q33_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q33 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of human ADP-ribose pyrophosphatase NUDT9===
+
==See Also==
-
 
+
*[[ADP-ribose pyrophosphatase 3D structures|ADP-ribose pyrophosphatase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12948489}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 12948489 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12948489}}
+
-
 
+
-
==About this Structure==
+
-
1Q33 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q33 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12948489</ref><references group="xtra"/>
+
-
[[Category: ADP-ribose diphosphatase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Perraud, A L.]]
+
[[Category: Large Structures]]
-
[[Category: Scharenberg, A.]]
+
[[Category: Perraud AL]]
-
[[Category: Shen, B W.]]
+
[[Category: Scharenberg A]]
-
[[Category: Stoddard, B L.]]
+
[[Category: Shen BW]]
-
[[Category: Nudix fold]]
+
[[Category: Stoddard BL]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:43:32 2009''
+

Current revision

Crystal structure of human ADP-ribose pyrophosphatase NUDT9

PDB ID 1q33

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1q33"
Personal tools