This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1qu9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1qu9" [edit=sysop:move=sysop])
Current revision (06:07, 17 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1qu9.png|left|200px]]
 
-
{{STRUCTURE_1qu9| PDB=1qu9 | SCENE= }}
+
==1.2 A CRYSTAL STRUCTURE OF YJGF GENE PRODUCT FROM E. COLI==
-
 
+
<StructureSection load='1qu9' size='340' side='right'caption='[[1qu9]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
-
===1.2 A CRYSTAL STRUCTURE OF YJGF GENE PRODUCT FROM E. COLI===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1qu9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QU9 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10595546}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSP:S-PHOSPHOCYSTEINE'>CSP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qu9 OCA], [https://pdbe.org/1qu9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qu9 RCSB], [https://www.ebi.ac.uk/pdbsum/1qu9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qu9 ProSAT]</span></td></tr>
-
[[1qu9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QU9 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/RIDA_ECOLI RIDA_ECOLI] Accelerates the release of ammonia from reactive enamine/imine intermediates of the PLP-dependent threonine dehydratase (IlvA) in the low water environment of the cell. It catalyzes the deamination of enamine/imine intermediates to yield 2-ketobutyrate and ammonia. It is required for the detoxification of reactive intermediates of IlvA due to their highly nucleophilic abilities. Involved in the isoleucine biosynthesis (By similarity).
-
<ref group="xtra">PMID:010595546</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qu/1qu9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qu9 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Volz, K.]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Volz K]]

Current revision

1.2 A CRYSTAL STRUCTURE OF YJGF GENE PRODUCT FROM E. COLI

PDB ID 1qu9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools