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1r4v

From Proteopedia

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{{Seed}}
 
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[[Image:1r4v.png|left|200px]]
 
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==1.9A crystal structure of protein AQ328 from Aquifex aeolicus==
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The line below this paragraph, containing "STRUCTURE_1r4v", creates the "Structure Box" on the page.
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<StructureSection load='1r4v' size='340' side='right'caption='[[1r4v]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1r4v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R4V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R4V FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1r4v| PDB=1r4v | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r4v OCA], [https://pdbe.org/1r4v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r4v RCSB], [https://www.ebi.ac.uk/pdbsum/1r4v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r4v ProSAT], [https://www.topsan.org/Proteins/MCSG/1r4v TOPSAN]</span></td></tr>
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</table>
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===1.9A crystal structure of protein AQ328 from Aquifex aeolicus===
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== Function ==
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[https://www.uniprot.org/uniprot/Y328_AQUAE Y328_AQUAE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_16287087}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 16287087 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r4/1r4v_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_16287087}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1R4V is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R4V OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r4v ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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The crystal structure of Aq_328 from the hyperthermophilic bacteria Aquifex aeolicus shows an ancestral histone fold., Qiu Y, Tereshko V, Kim Y, Zhang R, Collart F, Yousef M, Kossiakoff A, Joachimiak A, Proteins. 2006 Jan 1;62(1):8-16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16287087 16287087]
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</StructureSection>
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[[Category: Aquifex aeolicus]]
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[[Category: Aquifex aeolicus VF5]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Collart, F.]]
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[[Category: Collart F]]
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[[Category: Joachimiak, A.]]
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[[Category: Joachimiak A]]
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[[Category: Kim, Y.]]
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[[Category: Kim Y]]
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[[Category: Kossiakoff, A.]]
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[[Category: Kossiakoff A]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Qiu Y]]
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[[Category: Qiu, Y.]]
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[[Category: Tereshko V]]
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[[Category: Tereshko, V.]]
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[[Category: Zhang R]]
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[[Category: Zhang, R.]]
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[[Category: All-alpha]]
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[[Category: Histon fold]]
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[[Category: Mcsg]]
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[[Category: Midwest center for structural genomic]]
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[[Category: Protein structure initiative]]
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[[Category: Psi]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 23:40:52 2008''
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Current revision

1.9A crystal structure of protein AQ328 from Aquifex aeolicus

PDB ID 1r4v

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