This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2bw8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:38, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bw8.png|left|200px]]
 
-
{{STRUCTURE_2bw8| PDB=2bw8 | SCENE= }}
+
==Native structure of Endoglucanase 12A (Cel12A) from Rhodothermus marinus==
-
 
+
<StructureSection load='2bw8' size='340' side='right'caption='[[2bw8]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
-
===NATIVE STRUCTURE OF ENDOGLUCANASE 12A (CEL12A) FROM RHODOTHERMUS MARINUS===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2bw8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodothermus_marinus Rhodothermus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BW8 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_16343530}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw8 OCA], [https://pdbe.org/2bw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bw8 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw8 ProSAT]</span></td></tr>
-
[[2bw8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodothermus_marinus Rhodothermus marinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW8 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O33897_RHOMR O33897_RHOMR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/2bw8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bw8 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:016343530</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Cellulase]]
+
[[Category: Rhodothermus marinus]]
[[Category: Rhodothermus marinus]]
-
[[Category: Crennell, S J.]]
+
[[Category: Crennell SJ]]
-
[[Category: Nordberg-Karlsson, E.]]
+
[[Category: Nordberg-Karlsson E]]
-
[[Category: Cellulase]]
+
-
[[Category: Endoglucanase]]
+
-
[[Category: Glycoside hydrolase family 12]]
+
-
[[Category: Hydrolase]]
+

Current revision

Native structure of Endoglucanase 12A (Cel12A) from Rhodothermus marinus

PDB ID 2bw8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools