2hsk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:41, 1 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2hsk.png|left|200px]]
 
-
<!--
+
==NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer)==
-
The line below this paragraph, containing "STRUCTURE_2hsk", creates the "Structure Box" on the page.
+
<StructureSection load='2hsk' size='340' side='right'caption='[[2hsk]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2hsk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HSK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ORP:2-DEOXY-5-PHOSPHONO-RIBOSE'>ORP</scene></td></tr>
-
{{STRUCTURE_2hsk| PDB=2hsk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hsk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hsk OCA], [https://pdbe.org/2hsk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hsk RCSB], [https://www.ebi.ac.uk/pdbsum/2hsk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hsk ProSAT]</span></td></tr>
-
 
+
</table>
-
===NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer)===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Synthetic construct]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17323932}}, adds the Publication Abstract to the page
+
[[Category: Case DA]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 17323932 is the PubMed ID number.
+
[[Category: Chen J]]
-
-->
+
[[Category: Dupradeau FY]]
-
{{ABSTRACT_PUBMED_17323932}}
+
[[Category: Stubbe J]]
-
 
+
[[Category: Turner CJ]]
-
==About this Structure==
+
-
Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSK OCA].
+
-
 
+
-
==Reference==
+
-
Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites., Chen J, Dupradeau FY, Case DA, Turner CJ, Stubbe J, Biochemistry. 2007 Mar 20;46(11):3096-107. Epub 2007 Feb 27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17323932 17323932]
+
-
[[Category: Case, D A.]]
+
-
[[Category: Chen, J.]]
+
-
[[Category: Dupradeau, F Y.]]
+
-
[[Category: Stubbe, J.]]
+
-
[[Category: Turner, C J.]]
+
-
[[Category: Abasic site]]
+
-
[[Category: Ape1]]
+
-
[[Category: Base excision repair]]
+
-
[[Category: Dna lesion]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:06:52 2008''
+

Current revision

NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer)

PDB ID 2hsk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hsk"
Personal tools